Quarto for Transparent Reporting

From scripts to reports

The Problem

Run analysis 
↓ 
Copy figure manually 
↓ 
Paste into Word 
↓ 
Change analysis 
↓ 
Forget to update figure

What Quarto Does

Quarto combines:

• Narrative text

• R code

• Figures

• Tables

Into one reproducible document.

A Simple Workflow

Data 
↓ 
Scripts 
↓ 
Quarto document 
↓ 
HTML / PDF / Word / slides

What Are Parameters?

Parameterised reports

One report template can generate:

• multiple species reports

• multiple site reports

• multiple years

• multiple regions

Automatically.